Carnation DB

Dca14073.1

Annotation

5-exons
f-1
sp|B9H1S0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_855123#GO:0005524;GO:0016772#2F0P0C
Repeat List (scaffold166)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14073.1	101	292	325	18.76	192	32	1e-16
Target_name	Start	End	Length	Cov(%)
sp\|B9H1S0_POPTR	317	495	533	33.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14073.1	208	290	325	12	83	47	2e-16
Target_name	Start	End	Length	Cov(%)
AT4G23140.2	566	645	680	11.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold166	Augustus	mRNA	215844	224479	.	-	.	ID=Dca14073.1;Parent=Dca14073
scaffold166	Augustus	exon	215844	216176	.	-	.	ID=Dca14073.1.exon1;Parent=Dca14073.1
scaffold166	Augustus	exon	219271	219515	.	-	.	ID=Dca14073.1.exon2;Parent=Dca14073.1
scaffold166	Augustus	exon	223470	223517	.	-	.	ID=Dca14073.1.exon3;Parent=Dca14073.1
scaffold166	Augustus	exon	224020	224070	.	-	.	ID=Dca14073.1.exon4;Parent=Dca14073.1
scaffold166	Augustus	exon	224179	224479	.	-	.	ID=Dca14073.1.exon5;Parent=Dca14073.1