Carnation DB

Dca14332.1

Annotation

6-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Repeat List (scaffold16788)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14332.1	403	500	596	10.4	98	64	2e-31
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	1609	1706	1717	5.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14332.1	80	405	596	19.79	326	37	1e-53
Target_name	Start	End	Length	Cov(%)
Os08t0202300-03	10	316	591	51.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16788	Augustus	mRNA	319	5836	.	-	.	ID=Dca14332.1;Parent=Dca14332
scaffold16788	Augustus	exon	319	461	.	-	.	ID=Dca14332.1.exon1;Parent=Dca14332.1
scaffold16788	Augustus	exon	599	657	.	-	.	ID=Dca14332.1.exon2;Parent=Dca14332.1
scaffold16788	Augustus	exon	1735	1823	.	-	.	ID=Dca14332.1.exon3;Parent=Dca14332.1
scaffold16788	Augustus	exon	2383	2664	.	-	.	ID=Dca14332.1.exon4;Parent=Dca14332.1
scaffold16788	Augustus	exon	4473	5680	.	-	.	ID=Dca14332.1.exon5;Parent=Dca14332.1
scaffold16788	Augustus	exon	5827	5836	.	-	.	ID=Dca14332.1.exon6;Parent=Dca14332.1