Carnation DB

Dca14895.1

Annotation

13-exons
f-1
sp|C5YF70_SORBI#Putative uncharacterized protein Sb06g027550#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb06g027550#unknown#0F0P0C
AT5G17520.1 | Symbols: RCP1, MEX1 | root cap 1 (RCP1) | chr5:5772796-5775231 REVERSE LENGTH=415
Repeat List (scaffold1711)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14895.1	353	680	682	33.13	328	69	1e-122
Target_name	Start	End	Length	Cov(%)
sp\|C5YF70_SORBI	73	400	401	81.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14895.1	365	680	682	30.2	316	66	2e-120
Target_name	Start	End	Length	Cov(%)
AT5G17520.1	99	414	415	76.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1711	Augustus	mRNA	29857	36370	.	+	.	ID=Dca14895.1;Parent=Dca14895
scaffold1711	Augustus	exon	29857	30010	.	+	.	ID=Dca14895.1.exon1;Parent=Dca14895.1
scaffold1711	Augustus	exon	30362	30504	.	+	.	ID=Dca14895.1.exon2;Parent=Dca14895.1
scaffold1711	Augustus	exon	31363	31491	.	+	.	ID=Dca14895.1.exon3;Parent=Dca14895.1
scaffold1711	Augustus	exon	31578	31700	.	+	.	ID=Dca14895.1.exon4;Parent=Dca14895.1
scaffold1711	Augustus	exon	31871	32009	.	+	.	ID=Dca14895.1.exon5;Parent=Dca14895.1
scaffold1711	Augustus	exon	34044	34591	.	+	.	ID=Dca14895.1.exon6;Parent=Dca14895.1
scaffold1711	Augustus	exon	34893	35183	.	+	.	ID=Dca14895.1.exon7;Parent=Dca14895.1
scaffold1711	Augustus	exon	35268	35357	.	+	.	ID=Dca14895.1.exon8;Parent=Dca14895.1
scaffold1711	Augustus	exon	35449	35550	.	+	.	ID=Dca14895.1.exon9;Parent=Dca14895.1
scaffold1711	Augustus	exon	35626	35744	.	+	.	ID=Dca14895.1.exon10;Parent=Dca14895.1
scaffold1711	Augustus	exon	35846	35908	.	+	.	ID=Dca14895.1.exon11;Parent=Dca14895.1
scaffold1711	Augustus	exon	36000	36061	.	+	.	ID=Dca14895.1.exon12;Parent=Dca14895.1
scaffold1711	Augustus	exon	36285	36370	.	+	.	ID=Dca14895.1.exon13;Parent=Dca14895.1