Carnation DB

Dca15472.1

Annotation

9-exons
f-1
sp|F6I040_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0229g00110#GO:0003723#1F0P0C
AT4G17330.1 | Symbols: ATG2484-1, G2484-1 | G2484-1 protein | chr4:9689263-9697172 REVERSE LENGTH=2037
Repeat List (scaffold175)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15472.1	13	139	1281	4.29	127	42	1e-08
Target_name	Start	End	Length	Cov(%)
sp\|F6I040_VITVI	900	1025	2261	5.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15472.1	88	1269	1281	35.98	1182	37	9e-163
Target_name	Start	End	Length	Cov(%)
AT4G17330.1	839	2009	2037	57.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold175	Augustus	mRNA	142432	147648	.	+	.	ID=Dca15472.1;Parent=Dca15472
scaffold175	Augustus	exon	142432	142647	.	+	.	ID=Dca15472.1.exon1;Parent=Dca15472.1
scaffold175	Augustus	exon	142773	143010	.	+	.	ID=Dca15472.1.exon2;Parent=Dca15472.1
scaffold175	Augustus	exon	143434	143486	.	+	.	ID=Dca15472.1.exon3;Parent=Dca15472.1
scaffold175	Augustus	exon	143562	145523	.	+	.	ID=Dca15472.1.exon4;Parent=Dca15472.1
scaffold175	Augustus	exon	145615	145723	.	+	.	ID=Dca15472.1.exon5;Parent=Dca15472.1
scaffold175	Augustus	exon	145904	146084	.	+	.	ID=Dca15472.1.exon6;Parent=Dca15472.1
scaffold175	Augustus	exon	146274	146341	.	+	.	ID=Dca15472.1.exon7;Parent=Dca15472.1
scaffold175	Augustus	exon	146435	146547	.	+	.	ID=Dca15472.1.exon8;Parent=Dca15472.1
scaffold175	Augustus	exon	146743	147648	.	+	.	ID=Dca15472.1.exon9;Parent=Dca15472.1