Carnation DB

Dca15550.1

Annotation

6-exons
f-1
sp|A5BQ62_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040310#GO:0003676;GO:0015074#1F1P0C
sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold1754)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15550.1	214	446	448	28.34	233	49	7e-61
Target_name	Start	End	Length	Cov(%)
sp\|A5BQ62_VITVI	686	945	1461	17.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15550.1	311	448	448	10.93	138	35	2e-16
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	586	727	1401	10.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1754	Augustus	mRNA	20436	25505	.	+	.	ID=Dca15550.1;Parent=Dca15550
scaffold1754	Augustus	exon	20436	20708	.	+	.	ID=Dca15550.1.exon1;Parent=Dca15550.1
scaffold1754	Augustus	exon	21082	21229	.	+	.	ID=Dca15550.1.exon2;Parent=Dca15550.1
scaffold1754	Augustus	exon	21341	21933	.	+	.	ID=Dca15550.1.exon3;Parent=Dca15550.1
scaffold1754	Augustus	exon	22335	22665	.	+	.	ID=Dca15550.1.exon4;Parent=Dca15550.1
scaffold1754	Augustus	exon	22880	23307	.	+	.	ID=Dca15550.1.exon5;Parent=Dca15550.1
scaffold1754	Augustus	exon	25323	25505	.	+	.	ID=Dca15550.1.exon6;Parent=Dca15550.1