Carnation DB

Dca15607.1

Annotation

8-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|E7BQD5_SILLA#Gag-pol polyprotein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold1759)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15607.1	42	355	1119	13.58	314	49	6e-60
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	313	586	1717	15.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15607.1	221	351	1119	4.02	131	35	3e-11
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	49	177	192	67.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1759	Augustus	mRNA	1354	12179	.	+	.	ID=Dca15607.1;Parent=Dca15607
scaffold1759	Augustus	exon	1354	1405	.	+	.	ID=Dca15607.1.exon1;Parent=Dca15607.1
scaffold1759	Augustus	exon	1650	2657	.	+	.	ID=Dca15607.1.exon2;Parent=Dca15607.1
scaffold1759	Augustus	exon	2752	2874	.	+	.	ID=Dca15607.1.exon3;Parent=Dca15607.1
scaffold1759	Augustus	exon	3694	3821	.	+	.	ID=Dca15607.1.exon4;Parent=Dca15607.1
scaffold1759	Augustus	exon	5228	6745	.	+	.	ID=Dca15607.1.exon5;Parent=Dca15607.1
scaffold1759	Augustus	exon	11249	11368	.	+	.	ID=Dca15607.1.exon6;Parent=Dca15607.1
scaffold1759	Augustus	exon	11460	11612	.	+	.	ID=Dca15607.1.exon7;Parent=Dca15607.1
scaffold1759	Augustus	exon	11922	12179	.	+	.	ID=Dca15607.1.exon8;Parent=Dca15607.1