Carnation DB

Dca15668.1

Annotation

5-exons
f-1
sp|B9SSI8_RICCO#Lipid-A-disaccharide synthase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0511200#GO:0008915;GO:0009245#1F1P0C
Repeat List (scaffold1761)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15668.1	142	269	273	29.67	128	60	7e-37
Target_name	Start	End	Length	Cov(%)
sp\|B9SSI8_RICCO	332	466	469	28.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15668.1	144	271	273	28.93	128	59	4e-35
Target_name	Start	End	Length	Cov(%)
AT2G04560.1	326	459	460	29.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1761	Augustus	mRNA	56191	60407	.	-	.	ID=Dca15668.1;Parent=Dca15668
scaffold1761	Augustus	exon	56191	56359	.	-	.	ID=Dca15668.1.exon1;Parent=Dca15668.1
scaffold1761	Augustus	exon	56709	56935	.	-	.	ID=Dca15668.1.exon2;Parent=Dca15668.1
scaffold1761	Augustus	exon	59792	60015	.	-	.	ID=Dca15668.1.exon3;Parent=Dca15668.1
scaffold1761	Augustus	exon	60101	60206	.	-	.	ID=Dca15668.1.exon4;Parent=Dca15668.1
scaffold1761	Augustus	exon	60312	60407	.	-	.	ID=Dca15668.1.exon5;Parent=Dca15668.1