Dca15736.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold1767)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15736.1 |
19 |
144 |
158 |
37.34 |
126 |
47 |
7e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
943 |
1069 |
1499 |
8.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15736.1 |
22 |
148 |
158 |
29.11 |
127 |
36 |
1e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
931 |
1057 |
1539 |
8.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1767 |
Augustus |
mRNA |
60469 |
62059 |
. |
- |
. |
ID=Dca15736.1;Parent=Dca15736 |
| scaffold1767 |
Augustus |
exon |
60469 |
60881 |
. |
- |
. |
ID=Dca15736.1.exon1;Parent=Dca15736.1 |
| scaffold1767 |
Augustus |
exon |
61996 |
62059 |
. |
- |
. |
ID=Dca15736.1.exon2;Parent=Dca15736.1 |
