Dca16197.1
Annotation
- 4-exons
- f-1
- sp|B9RD12_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1608630#GO:0005488;GO:0016874#2F0P0C
- Repeat List (scaffold18)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16197.1 |
432 |
573 |
604 |
8.11 |
142 |
34 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RD12_RICCO |
552 |
696 |
920 |
15.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16197.1 |
391 |
526 |
604 |
8.27 |
136 |
36 |
3e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G60350.1 |
606 |
735 |
928 |
14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18 |
Augustus |
mRNA |
128101 |
131892 |
. |
+ |
. |
ID=Dca16197.1;Parent=Dca16197 |
| scaffold18 |
Augustus |
exon |
128101 |
129474 |
. |
+ |
. |
ID=Dca16197.1.exon1;Parent=Dca16197.1 |
| scaffold18 |
Augustus |
exon |
129569 |
129727 |
. |
+ |
. |
ID=Dca16197.1.exon2;Parent=Dca16197.1 |
| scaffold18 |
Augustus |
exon |
131491 |
131577 |
. |
+ |
. |
ID=Dca16197.1.exon3;Parent=Dca16197.1 |
| scaffold18 |
Augustus |
exon |
131698 |
131892 |
. |
+ |
. |
ID=Dca16197.1.exon4;Parent=Dca16197.1 |
