Dca16248.1
Annotation
- 2-exons
- f-1
- sp|Q8LMF6_ORYSJ#Putative retroelement#Oryza sativa subsp japonica (Rice)#Name=OJ1325D05.14#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold180)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16248.1 |
16 |
541 |
542 |
34.68 |
526 |
33 |
2e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8LMF6_ORYSJ |
28 |
577 |
1250 |
44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16248.1 |
321 |
541 |
542 |
13.28 |
221 |
33 |
3e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0671800-01 |
268 |
488 |
573 |
38.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold180 |
Augustus |
mRNA |
19272 |
21007 |
. |
- |
. |
ID=Dca16248.1;Parent=Dca16248 |
| scaffold180 |
Augustus |
exon |
19272 |
20202 |
. |
- |
. |
ID=Dca16248.1.exon1;Parent=Dca16248.1 |
| scaffold180 |
Augustus |
exon |
20310 |
21007 |
. |
- |
. |
ID=Dca16248.1.exon2;Parent=Dca16248.1 |
