Carnation DB

Dca16279.1

Annotation

8-exons
f-1
sp|D7TEH2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0059g01710#unknown#0F0P0C
AT1G11070.1 | Symbols: | BEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in 152 species: Archae - 0; Bacteria - 68; Metazoa - 159; Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). | chr1:3690406-3693648 REVERSE LENGTH=763
Repeat List (scaffold1800)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16279.1	24	240	740	10.67	217	36	3e-23
Target_name	Start	End	Length	Cov(%)
sp\|D7TEH2_VITVI	18	223	653	31.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16279.1	38	261	740	11.89	224	39	2e-31
Target_name	Start	End	Length	Cov(%)
AT4G04980.1	112	337	880	25.68

seqname	source	feature	start	end	score	strand	frame	group
scaffold1800	Augustus	mRNA	30152	34180	.	-	.	ID=Dca16279.1;Parent=Dca16279
scaffold1800	Augustus	exon	30152	30358	.	-	.	ID=Dca16279.1.exon1;Parent=Dca16279.1
scaffold1800	Augustus	exon	30906	31058	.	-	.	ID=Dca16279.1.exon2;Parent=Dca16279.1
scaffold1800	Augustus	exon	31150	31314	.	-	.	ID=Dca16279.1.exon3;Parent=Dca16279.1
scaffold1800	Augustus	exon	31806	31857	.	-	.	ID=Dca16279.1.exon4;Parent=Dca16279.1
scaffold1800	Augustus	exon	31961	33164	.	-	.	ID=Dca16279.1.exon5;Parent=Dca16279.1
scaffold1800	Augustus	exon	33283	33403	.	-	.	ID=Dca16279.1.exon6;Parent=Dca16279.1
scaffold1800	Augustus	exon	33491	33586	.	-	.	ID=Dca16279.1.exon7;Parent=Dca16279.1
scaffold1800	Augustus	exon	33956	34180	.	-	.	ID=Dca16279.1.exon8;Parent=Dca16279.1