Dca16326.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1805)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16326.1 |
30 |
671 |
679 |
52.57 |
642 |
56 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
319 |
953 |
1313 |
48.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16326.1 |
496 |
671 |
679 |
11.63 |
176 |
45 |
3e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
902 |
1074 |
1428 |
12.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1805 |
Augustus |
mRNA |
15038 |
17310 |
. |
+ |
. |
ID=Dca16326.1;Parent=Dca16326 |
| scaffold1805 |
Augustus |
exon |
15038 |
16473 |
. |
+ |
. |
ID=Dca16326.1.exon1;Parent=Dca16326.1 |
| scaffold1805 |
Augustus |
exon |
16707 |
17310 |
. |
+ |
. |
ID=Dca16326.1.exon2;Parent=Dca16326.1 |
