Carnation DB

Dca16372.1

Annotation

5-exons
f-1
sp|A2I5F1_BETVU#Transposon-like protein#Beta vulgaris (Sugar beet)#unknown#unknown#0F0P0C
Repeat List (scaffold1808)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16372.1	1	73	268	12.31	73	46	1e-09
Target_name	Start	End	Length	Cov(%)
sp\|A2I5F1_BETVU	710	782	1399	5.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16372.1	2	249	285	36.84	248	35	7e-37
Target_name	Start	End	Length	Cov(%)
Os08t0208400-02	285	581	829	35.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1808	Augustus	mRNA	58665	61886	.	+	.	ID=Dca16372.1;Parent=Dca16372
scaffold1808	Augustus	exon	58665	58830	.	+	.	ID=Dca16372.1.exon1;Parent=Dca16372.1
scaffold1808	Augustus	exon	58987	59677	.	+	.	ID=Dca16372.1.exon2;Parent=Dca16372.1
scaffold1808	Augustus	exon	60511	60825	.	+	.	ID=Dca16372.1.exon3;Parent=Dca16372.1
scaffold1808	Augustus	exon	60909	61008	.	+	.	ID=Dca16372.1.exon4;Parent=Dca16372.1
scaffold1808	Augustus	exon	61305	61886	.	+	.	ID=Dca16372.1.exon5;Parent=Dca16372.1