Dca16387.1
Annotation
- 2-exons
- f-2
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold18090)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16387.1 |
113 |
343 |
435 |
28.96 |
231 |
55 |
1e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
492 |
718 |
1717 |
13.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16387.1 |
128 |
219 |
435 |
6.2 |
92 |
30 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
188 |
192 |
47.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18090 |
Augustus |
mRNA |
403 |
3605 |
. |
+ |
. |
ID=Dca16387.1;Parent=Dca16387 |
| scaffold18090 |
Augustus |
exon |
403 |
700 |
. |
+ |
. |
ID=Dca16387.1.exon1;Parent=Dca16387.1 |
| scaffold18090 |
Augustus |
exon |
2598 |
3605 |
. |
+ |
. |
ID=Dca16387.1.exon2;Parent=Dca16387.1 |
