Carnation DB

Dca16388.1

Annotation

5-exons
f-1
sp|A5C7C5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_017633#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os08t0125300-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold18092)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16388.1	426	640	683	17.86	215	52	2e-63
Target_name	Start	End	Length	Cov(%)
sp\|A5C7C5_VITVI	274	509	645	36.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16388.1	452	640	683	10.39	189	37	6e-34
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	500	686	1428	13.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold18092	Augustus	mRNA	1	3300	.	-	.	ID=Dca16388.1;Parent=Dca16388
scaffold18092	Augustus	exon	1	131	.	-	.	ID=Dca16388.1.exon1;Parent=Dca16388.1
scaffold18092	Augustus	exon	441	949	.	-	.	ID=Dca16388.1.exon2;Parent=Dca16388.1
scaffold18092	Augustus	exon	1276	1435	.	-	.	ID=Dca16388.1.exon3;Parent=Dca16388.1
scaffold18092	Augustus	exon	1930	2207	.	-	.	ID=Dca16388.1.exon4;Parent=Dca16388.1
scaffold18092	Augustus	exon	2328	3300	.	-	.	ID=Dca16388.1.exon5;Parent=Dca16388.1