Carnation DB

Dca16584.1

Annotation

8-exons
f-1
sp|A9PF05_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0016773#1F0P0C
AT1G74320.1 | Symbols: | Protein kinase superfamily protein | chr1:27941192-27942903 FORWARD LENGTH=350
Repeat List (scaffold1823)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16584.1	66	405	406	62.31	340	74	5e-154
Target_name	Start	End	Length	Cov(%)
sp\|A9PF05_POPTR	1	343	359	95.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16584.1	64	406	406	57.63	343	68	1e-141
Target_name	Start	End	Length	Cov(%)
AT1G74320.1	1	347	350	99.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1823	Augustus	mRNA	5477	9540	.	-	.	ID=Dca16584.1;Parent=Dca16584
scaffold1823	Augustus	exon	5477	5575	.	-	.	ID=Dca16584.1.exon1;Parent=Dca16584.1
scaffold1823	Augus-PASA	exon	6374	6474	.	-	.	ID=Dca16584.1.exon2;Parent=Dca16584.1
scaffold1823	Augus-PASA	exon	6608	6655	.	-	.	ID=Dca16584.1.exon3;Parent=Dca16584.1
scaffold1823	Augus-PASA	exon	7039	7156	.	-	.	ID=Dca16584.1.exon4;Parent=Dca16584.1
scaffold1823	Augus-PASA	exon	7431	7623	.	-	.	ID=Dca16584.1.exon5;Parent=Dca16584.1
scaffold1823	Augus-PASA	exon	7708	7829	.	-	.	ID=Dca16584.1.exon6;Parent=Dca16584.1
scaffold1823	Augustus	exon	8070	8433	.	-	.	ID=Dca16584.1.exon7;Parent=Dca16584.1
scaffold1823	Augustus	exon	9365	9540	.	-	.	ID=Dca16584.1.exon8;Parent=Dca16584.1