Dca16647.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold1828)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16647.1 |
3 |
119 |
700 |
5.85 |
117 |
35 |
3e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
171 |
286 |
1717 |
6.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16647.1 |
210 |
318 |
700 |
5.57 |
109 |
36 |
5e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
82 |
189 |
192 |
56.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1828 |
Augustus |
mRNA |
41179 |
46345 |
. |
+ |
. |
ID=Dca16647.1;Parent=Dca16647 |
| scaffold1828 |
Augustus |
exon |
41179 |
41533 |
. |
+ |
. |
ID=Dca16647.1.exon1;Parent=Dca16647.1 |
| scaffold1828 |
Augustus |
exon |
41964 |
42877 |
. |
+ |
. |
ID=Dca16647.1.exon2;Parent=Dca16647.1 |
| scaffold1828 |
Augustus |
exon |
45512 |
46345 |
. |
+ |
. |
ID=Dca16647.1.exon3;Parent=Dca16647.1 |
