Dca16650.1
Annotation
- 4-exons
- f-1
- sp|Q52MZ2_TOBAC#TGA10 transcription factor#Nicotiana tabacum (Common tobacco)#unknown#GO:0005634;GO:0046983;GO:0043565;GO:0003700#3F0P1C
- Repeat List (scaffold1829)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16650.1 |
3 |
168 |
171 |
76.02 |
166 |
69 |
2e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q52MZ2_TOBAC |
192 |
380 |
506 |
37.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16650.1 |
3 |
168 |
171 |
66.66 |
166 |
60 |
1e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G06839.3 |
139 |
328 |
460 |
41.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1829 |
Augustus |
mRNA |
24305 |
27776 |
. |
- |
. |
ID=Dca16650.1;Parent=Dca16650 |
| scaffold1829 |
Augustus |
exon |
24305 |
24597 |
. |
- |
. |
ID=Dca16650.1.exon1;Parent=Dca16650.1 |
| scaffold1829 |
Augustus |
exon |
26353 |
26419 |
. |
- |
. |
ID=Dca16650.1.exon2;Parent=Dca16650.1 |
| scaffold1829 |
Augustus |
exon |
26936 |
27013 |
. |
- |
. |
ID=Dca16650.1.exon3;Parent=Dca16650.1 |
| scaffold1829 |
Augustus |
exon |
27699 |
27776 |
. |
- |
. |
ID=Dca16650.1.exon4;Parent=Dca16650.1 |
