Dca16720.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1833)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16720.1 |
1 |
192 |
194 |
63.4 |
192 |
57 |
2e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1098 |
1313 |
1313 |
16.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16720.1 |
4 |
177 |
194 |
30.41 |
174 |
30 |
7e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1187 |
1382 |
1401 |
13.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1833 |
Augustus |
mRNA |
80712 |
81368 |
. |
+ |
. |
ID=Dca16720.1;Parent=Dca16720 |
| scaffold1833 |
Augustus |
exon |
80712 |
80967 |
. |
+ |
. |
ID=Dca16720.1.exon1;Parent=Dca16720.1 |
| scaffold1833 |
Augustus |
exon |
81040 |
81368 |
. |
+ |
. |
ID=Dca16720.1.exon2;Parent=Dca16720.1 |
