Carnation DB

Dca16757.1

Annotation

7-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold1837)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16757.1	181	863	1028	33.17	683	50	9e-170
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	143	750	1717	35.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16757.1	615	707	1028	3.5	93	39	9e-13
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	189	192	47.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1837	Augustus	mRNA	29026	34453	.	+	.	ID=Dca16757.1;Parent=Dca16757
scaffold1837	Augustus	exon	29026	29218	.	+	.	ID=Dca16757.1.exon1;Parent=Dca16757.1
scaffold1837	Augustus	exon	29737	29820	.	+	.	ID=Dca16757.1.exon2;Parent=Dca16757.1
scaffold1837	Augustus	exon	30455	30606	.	+	.	ID=Dca16757.1.exon3;Parent=Dca16757.1
scaffold1837	Augustus	exon	30974	33341	.	+	.	ID=Dca16757.1.exon4;Parent=Dca16757.1
scaffold1837	Augustus	exon	33470	33553	.	+	.	ID=Dca16757.1.exon5;Parent=Dca16757.1
scaffold1837	Augustus	exon	34186	34314	.	+	.	ID=Dca16757.1.exon6;Parent=Dca16757.1
scaffold1837	Augustus	exon	34377	34453	.	+	.	ID=Dca16757.1.exon7;Parent=Dca16757.1