Dca16821.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold18401)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16821.1 |
51 |
371 |
371 |
32.61 |
321 |
35 |
8e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
23 |
371 |
1501 |
23.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16821.1 |
64 |
234 |
371 |
14.01 |
171 |
31 |
4e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
250 |
296 |
57.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18401 |
Augustus |
mRNA |
9547 |
11180 |
. |
+ |
. |
ID=Dca16821.1;Parent=Dca16821 |
| scaffold18401 |
Augustus |
exon |
9547 |
9624 |
. |
+ |
. |
ID=Dca16821.1.exon1;Parent=Dca16821.1 |
| scaffold18401 |
Augustus |
exon |
10146 |
11180 |
. |
+ |
. |
ID=Dca16821.1.exon2;Parent=Dca16821.1 |
