Dca16880.1
Annotation
- 4-exons
- f-1
- sp|A5ALT9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021427#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1846)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16880.1 |
23 |
395 |
613 |
24.79 |
373 |
38 |
4e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ALT9_VITVI |
15 |
404 |
1473 |
26.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16880.1 |
382 |
570 |
613 |
10.76 |
189 |
35 |
3e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1141 |
1328 |
1401 |
13.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1846 |
Augustus |
mRNA |
5102 |
9375 |
. |
- |
. |
ID=Dca16880.1;Parent=Dca16880 |
| scaffold1846 |
Augustus |
exon |
5102 |
5215 |
. |
- |
. |
ID=Dca16880.1.exon1;Parent=Dca16880.1 |
| scaffold1846 |
Augustus |
exon |
5549 |
6115 |
. |
- |
. |
ID=Dca16880.1.exon2;Parent=Dca16880.1 |
| scaffold1846 |
Augustus |
exon |
8121 |
9035 |
. |
- |
. |
ID=Dca16880.1.exon3;Parent=Dca16880.1 |
| scaffold1846 |
Augustus |
exon |
9130 |
9375 |
. |
- |
. |
ID=Dca16880.1.exon4;Parent=Dca16880.1 |
