Carnation DB

Dca16886.1

Annotation

7-exons
f-1
sp|D7SH86_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g00140#GO:0003676;GO:0000166#2F0P0C
AT3G56510.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:20944348-20946235 REVERSE LENGTH=257
Repeat List (scaffold1847)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16886.1	20	235	237	59.91	216	66	4e-79
Target_name	Start	End	Length	Cov(%)
sp\|D7SH86_VITVI	127	344	344	63.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16886.1	21	234	237	54.43	214	60	1e-71
Target_name	Start	End	Length	Cov(%)
AT3G56510.1	43	257	257	83.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1847	Augus-PASA	mRNA	16197	20185	.	-	.	ID=Dca16886.1;Parent=Dca16886
scaffold1847	Augus-PASA	exon	16197	16223	.	-	.	ID=Dca16886.1.exon1;Parent=Dca16886.1
scaffold1847	Augus-PASA	exon	16320	16466	.	-	.	ID=Dca16886.1.exon2;Parent=Dca16886.1
scaffold1847	Augus-PASA	exon	17362	17492	.	-	.	ID=Dca16886.1.exon3;Parent=Dca16886.1
scaffold1847	Augus-PASA	exon	17587	17676	.	-	.	ID=Dca16886.1.exon4;Parent=Dca16886.1
scaffold1847	Augus-PASA	exon	18109	18176	.	-	.	ID=Dca16886.1.exon5;Parent=Dca16886.1
scaffold1847	Augus-PASA	exon	18270	18333	.	-	.	ID=Dca16886.1.exon6;Parent=Dca16886.1
scaffold1847	Augus-PASA	exon	19999	20185	.	-	.	ID=Dca16886.1.exon7;Parent=Dca16886.1