Carnation DB

Dca16930.1

Annotation

6-exons
f-1
sp|G7JEF5_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g007080#GO:0016757#1F0P0C
AT1G15980.1 | Symbols: NDF1, NDH48 | NDH-dependent cyclic electron flow 1 | chr1:5489314-5491199 FORWARD LENGTH=461
Repeat List (scaffold185)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16930.1	30	457	465	66.88	428	73	0
Target_name	Start	End	Length	Cov(%)
sp\|G7JEF5_MEDTR	42	468	472	90.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16930.1	5	457	465	67.09	453	69	2e-176
Target_name	Start	End	Length	Cov(%)
AT1G15980.1	8	457	461	97.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold185	Augustus	mRNA	172291	174276	.	-	.	ID=Dca16930.1;Parent=Dca16930
scaffold185	Augustus	exon	172291	172468	.	-	.	ID=Dca16930.1.exon1;Parent=Dca16930.1
scaffold185	Augustus	exon	172623	172708	.	-	.	ID=Dca16930.1.exon2;Parent=Dca16930.1
scaffold185	Augustus	exon	172880	172985	.	-	.	ID=Dca16930.1.exon3;Parent=Dca16930.1
scaffold185	Augustus	exon	173066	173323	.	-	.	ID=Dca16930.1.exon4;Parent=Dca16930.1
scaffold185	Augustus	exon	173424	173614	.	-	.	ID=Dca16930.1.exon5;Parent=Dca16930.1
scaffold185	Augustus	exon	173698	174276	.	-	.	ID=Dca16930.1.exon6;Parent=Dca16930.1