Carnation DB

Dca17062.1

Annotation

7-exons
f-1
sp|B9GMU5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_640120#GO:0004801;GO:0006098#1F1P0C
Os01t0926300-01 Similar to Transaldolase (EC 2.2.1.2).
Repeat List (scaffold186)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17062.1	21	437	438	76.94	417	81	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GMU5_POPTR	33	439	440	92.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17062.1	57	434	438	72.37	378	84	0
Target_name	Start	End	Length	Cov(%)
Os01t0926300-01	50	427	433	87.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold186	Augus-PASA	mRNA	81940	85753	.	+	.	ID=Dca17062.1;Parent=Dca17062
scaffold186	Augus-PASA	exon	81940	82115	.	+	.	ID=Dca17062.1.exon1;Parent=Dca17062.1
scaffold186	Augus-PASA	exon	82198	82369	.	+	.	ID=Dca17062.1.exon2;Parent=Dca17062.1
scaffold186	Augus-PASA	exon	82484	82533	.	+	.	ID=Dca17062.1.exon3;Parent=Dca17062.1
scaffold186	Augus-PASA	exon	83536	83836	.	+	.	ID=Dca17062.1.exon4;Parent=Dca17062.1
scaffold186	Augus-PASA	exon	84927	85115	.	+	.	ID=Dca17062.1.exon5;Parent=Dca17062.1
scaffold186	Augus-PASA	exon	85216	85398	.	+	.	ID=Dca17062.1.exon6;Parent=Dca17062.1
scaffold186	Augus-PASA	exon	85508	85753	.	+	.	ID=Dca17062.1.exon7;Parent=Dca17062.1