Carnation DB

Dca17102.1

Annotation

5-exons
f-1
sp|B9S381_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0731250#GO:0004842;GO:0008270#2F0P0C
Repeat List (scaffold1861)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17102.1	1	1307	1308	41.43	1307	38	3e-157
Target_name	Start	End	Length	Cov(%)
sp\|B9S381_RICCO	1	1328	1329	99.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17102.1	1218	1279	1308	1.98	62	42	3e-09
Target_name	Start	End	Length	Cov(%)
Os12t0155300-01	277	339	367	17.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1861	Augustus	mRNA	44642	49019	.	+	.	ID=Dca17102.1;Parent=Dca17102
scaffold1861	Augustus	exon	44642	44848	.	+	.	ID=Dca17102.1.exon1;Parent=Dca17102.1
scaffold1861	Augustus	exon	44938	45153	.	+	.	ID=Dca17102.1.exon2;Parent=Dca17102.1
scaffold1861	Augustus	exon	45251	48481	.	+	.	ID=Dca17102.1.exon3;Parent=Dca17102.1
scaffold1861	Augus-PASA	exon	48600	48781	.	+	.	ID=Dca17102.1.exon4;Parent=Dca17102.1
scaffold1861	Augus-PASA	exon	48929	49019	.	+	.	ID=Dca17102.1.exon5;Parent=Dca17102.1