Dca17145.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold18653)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17145.1 |
51 |
104 |
104 |
30.76 |
54 |
60 |
1e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
272 |
325 |
964 |
5.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17145.1 |
51 |
95 |
104 |
22.11 |
45 |
50 |
4e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
686 |
731 |
1428 |
3.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18653 |
Augustus |
mRNA |
313 |
2801 |
. |
- |
. |
ID=Dca17145.1;Parent=Dca17145 |
| scaffold18653 |
Augustus |
exon |
313 |
464 |
. |
- |
. |
ID=Dca17145.1.exon1;Parent=Dca17145.1 |
| scaffold18653 |
Augustus |
exon |
2639 |
2801 |
. |
- |
. |
ID=Dca17145.1.exon2;Parent=Dca17145.1 |
