Carnation DB

Dca172.1

Annotation

9-exons
f-1
sp|D7SK52_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g05820#GO:0005743;GO:0042719;GO:0046872;GO:0045039#1F1P2C
Os07t0243100-01 Similar to Mitochondrial import inner membrane translocase subunit Tim10.
Repeat List (scaffold10)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca172.1	6	82	155	32.25	77	65	5e-20
Target_name	Start	End	Length	Cov(%)
sp\|D7SK52_VITVI	4	78	84	89.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca172.1	12	82	155	26.45	71	58	7e-18
Target_name	Start	End	Length	Cov(%)
Os07t0243100-01	17	85	91	75.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10	Augustus	mRNA	360837	363840	.	-	.	ID=Dca172.1;Parent=Dca172
scaffold10	Augustus	exon	360837	360887	.	-	.	ID=Dca172.1.exon1;Parent=Dca172.1
scaffold10	Augustus	exon	361213	361282	.	-	.	ID=Dca172.1.exon2;Parent=Dca172.1
scaffold10	Augustus	exon	361377	361415	.	-	.	ID=Dca172.1.exon3;Parent=Dca172.1
scaffold10	Augustus	exon	361719	361771	.	-	.	ID=Dca172.1.exon4;Parent=Dca172.1
scaffold10	Augustus	exon	362476	362530	.	-	.	ID=Dca172.1.exon5;Parent=Dca172.1
scaffold10	Augustus	exon	362602	362661	.	-	.	ID=Dca172.1.exon6;Parent=Dca172.1
scaffold10	Augustus	exon	362756	362794	.	-	.	ID=Dca172.1.exon7;Parent=Dca172.1
scaffold10	Augustus	exon	363095	363147	.	-	.	ID=Dca172.1.exon8;Parent=Dca172.1
scaffold10	Augustus	exon	363793	363840	.	-	.	ID=Dca172.1.exon9;Parent=Dca172.1