Dca17295.1
Annotation
- 3-exons
- f-1
- sp|Q2HX35_IPOBA#LINE-type retrotransposon LIb DNA, complete sequence, Insertion at the S11 site#Ipomoea batatas (Sweet potato) (Convolvulus batatas)#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0008270;GO:0006278#4F1P0C
- Repeat List (scaffold1877)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17295.1 |
9 |
93 |
195 |
17.43 |
85 |
40 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2HX35_IPOBA |
1364 |
1445 |
1898 |
4.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1877 |
Augustus |
mRNA |
54628 |
58013 |
. |
+ |
. |
ID=Dca17295.1;Parent=Dca17295 |
| scaffold1877 |
Augustus |
exon |
54628 |
54909 |
. |
+ |
. |
ID=Dca17295.1.exon1;Parent=Dca17295.1 |
| scaffold1877 |
Augustus |
exon |
55250 |
55323 |
. |
+ |
. |
ID=Dca17295.1.exon2;Parent=Dca17295.1 |
| scaffold1877 |
Augustus |
exon |
57782 |
58013 |
. |
+ |
. |
ID=Dca17295.1.exon3;Parent=Dca17295.1 |
