Carnation DB

Dca17499.1

Annotation

5-exons
f-1
sp|A2Z337_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_32038#GO:0005622;GO:0005525;GO:0003924;GO:0003743#3F0P1C
Os09t0515500-01 Translation initiation factor 2 related domain containing protein.
Repeat List (scaffold1892)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17499.1	10	663	663	66.36	654	67	0
Target_name	Start	End	Length	Cov(%)
sp\|A2Z337_ORYSI	68	716	716	90.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17499.1	10	663	663	66.21	654	67	0
Target_name	Start	End	Length	Cov(%)
Os09t0515500-01	68	716	717	90.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1892	Augustus	mRNA	44738	47870	.	-	.	ID=Dca17499.1;Parent=Dca17499
scaffold1892	Augustus	exon	44738	45172	.	-	.	ID=Dca17499.1.exon1;Parent=Dca17499.1
scaffold1892	Augustus	exon	45286	45435	.	-	.	ID=Dca17499.1.exon2;Parent=Dca17499.1
scaffold1892	Augustus	exon	45638	46690	.	-	.	ID=Dca17499.1.exon3;Parent=Dca17499.1
scaffold1892	Augustus	exon	46883	47213	.	-	.	ID=Dca17499.1.exon4;Parent=Dca17499.1
scaffold1892	Augustus	exon	47848	47870	.	-	.	ID=Dca17499.1.exon5;Parent=Dca17499.1