Carnation DB

Dca17560.1

Annotation

5-exons
f-1
sp|F6HMV0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g00770#unknown#0F0P0C
Os04t0636700-01 Similar to 117M18_7.
Repeat List (scaffold1898)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17560.1	1	493	494	51.21	493	48	2e-102
Target_name	Start	End	Length	Cov(%)
sp\|F6HMV0_VITVI	155	668	668	76.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17560.1	2	378	494	29.55	377	37	2e-59
Target_name	Start	End	Length	Cov(%)
Os12t0126800-01	67	449	586	65.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1898	Augustus	mRNA	28345	38781	.	+	.	ID=Dca17560.1;Parent=Dca17560
scaffold1898	Augustus	exon	28345	28527	.	+	.	ID=Dca17560.1.exon1;Parent=Dca17560.1
scaffold1898	Augustus	exon	28612	28773	.	+	.	ID=Dca17560.1.exon2;Parent=Dca17560.1
scaffold1898	Augustus	exon	28892	29048	.	+	.	ID=Dca17560.1.exon3;Parent=Dca17560.1
scaffold1898	Augustus	exon	33936	34075	.	+	.	ID=Dca17560.1.exon4;Parent=Dca17560.1
scaffold1898	Augustus	exon	37939	38781	.	+	.	ID=Dca17560.1.exon5;Parent=Dca17560.1