Carnation DB

Dca17719.1

Annotation

7-exons
f-1
sp|B9R9C7_RICCO#Pre-mRNA cleavage factor im, 25kD subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1496400#GO:0016787#1F0P0C
Repeat List (scaffold1903)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17719.1	1	199	206	63.1	199	66	2e-75
Target_name	Start	End	Length	Cov(%)
sp\|B9R9C7_RICCO	1	199	200	99.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17719.1	1	199	206	59.7	199	62	1e-72
Target_name	Start	End	Length	Cov(%)
AT4G25550.1	1	199	200	99.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1903	Augustus	mRNA	42835	44614	.	+	.	ID=Dca17719.1;Parent=Dca17719
scaffold1903	Augustus	exon	42835	42953	.	+	.	ID=Dca17719.1.exon1;Parent=Dca17719.1
scaffold1903	Augustus	exon	43662	43707	.	+	.	ID=Dca17719.1.exon2;Parent=Dca17719.1
scaffold1903	Augustus	exon	43811	43904	.	+	.	ID=Dca17719.1.exon3;Parent=Dca17719.1
scaffold1903	Augustus	exon	43999	44072	.	+	.	ID=Dca17719.1.exon4;Parent=Dca17719.1
scaffold1903	Augustus	exon	44164	44250	.	+	.	ID=Dca17719.1.exon5;Parent=Dca17719.1
scaffold1903	Augustus	exon	44328	44438	.	+	.	ID=Dca17719.1.exon6;Parent=Dca17719.1
scaffold1903	Augustus	exon	44525	44614	.	+	.	ID=Dca17719.1.exon7;Parent=Dca17719.1