Dca17927.1
Annotation
- 4-exons
- f-1
- sp|B9IAD9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_664708#unknown#0F0P0C
- AT3G59280.1 | Symbols: TXR1 | Protein Transporter, Pam16 | chr3:21909266-21910519 REVERSE LENGTH=116
- Repeat List (scaffold1918)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17927.1 |
166 |
248 |
250 |
22.8 |
83 |
69 |
6e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IAD9_POPTR |
32 |
114 |
116 |
71.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17927.1 |
166 |
245 |
250 |
22.8 |
80 |
72 |
6e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G59280.1 |
32 |
111 |
116 |
68.96 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1918 |
Augustus |
mRNA |
66966 |
69439 |
. |
- |
. |
ID=Dca17927.1;Parent=Dca17927 |
| scaffold1918 |
Augustus |
exon |
66966 |
67091 |
. |
- |
. |
ID=Dca17927.1.exon1;Parent=Dca17927.1 |
| scaffold1918 |
Augustus |
exon |
67175 |
67308 |
. |
- |
. |
ID=Dca17927.1.exon2;Parent=Dca17927.1 |
| scaffold1918 |
Augustus |
exon |
68777 |
68942 |
. |
- |
. |
ID=Dca17927.1.exon3;Parent=Dca17927.1 |
| scaffold1918 |
Augustus |
exon |
69113 |
69439 |
. |
- |
. |
ID=Dca17927.1.exon4;Parent=Dca17927.1 |
