Carnation DB

Dca17963.1

Annotation

9-exons
f-1
sp|D7TGP5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0035g01430#GO:0005634;GO:0003677;GO:0008270;GO:0016570;GO:0006352#2F2P1C
sp|G7J7X0_MEDTR#Zinc finger CCCH domain-containing protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g064260#GO:0005634;GO:0003677;GO:0008270;GO:0016570;GO:0006352#2F2P1C
Repeat List (scaffold192)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17963.1	36	618	640	41.25	583	45	1e-131
Target_name	Start	End	Length	Cov(%)
sp\|D7TGP5_VITVI	12	555	819	66.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17963.1	42	608	640	37.03	567	41	2e-104
Target_name	Start	End	Length	Cov(%)
AT5G63700.1	24	585	602	93.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold192	Augus-PASA	mRNA	156622	162217	.	+	.	ID=Dca17963.1;Parent=Dca17963
scaffold192	Augus-PASA	exon	156622	156794	.	+	.	ID=Dca17963.1.exon1;Parent=Dca17963.1
scaffold192	Augus-PASA	exon	158542	158621	.	+	.	ID=Dca17963.1.exon2;Parent=Dca17963.1
scaffold192	Augustus	exon	158753	158940	.	+	.	ID=Dca17963.1.exon3;Parent=Dca17963.1
scaffold192	Augustus	exon	159423	160410	.	+	.	ID=Dca17963.1.exon4;Parent=Dca17963.1
scaffold192	Augustus	exon	160798	160904	.	+	.	ID=Dca17963.1.exon5;Parent=Dca17963.1
scaffold192	Augustus	exon	161033	161092	.	+	.	ID=Dca17963.1.exon6;Parent=Dca17963.1
scaffold192	Augustus	exon	161396	161446	.	+	.	ID=Dca17963.1.exon7;Parent=Dca17963.1
scaffold192	Augustus	exon	161652	161722	.	+	.	ID=Dca17963.1.exon8;Parent=Dca17963.1
scaffold192	Augustus	exon	162013	162217	.	+	.	ID=Dca17963.1.exon9;Parent=Dca17963.1