Dca18796.1
Annotation
- 3-exons
- f-1
- sp|F6HI46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0151g00870#GO:0005840;GO:0003677;GO:0003723;GO:0003735;GO:0008270;GO:0006412#4F1P1C
- AT4G09800.1 | Symbols: RPS18C | S18 ribosomal protein | chr4:6173818-6174963 FORWARD LENGTH=152
- Repeat List (scaffold198)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18796.1 |
1 |
151 |
151 |
90.06 |
151 |
91 |
9e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HI46_VITVI |
1465 |
1615 |
1615 |
9.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18796.1 |
1 |
151 |
151 |
90.06 |
151 |
91 |
8e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G09800.1 |
2 |
152 |
152 |
99.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold198 |
Augustus |
mRNA |
33242 |
35093 |
. |
+ |
. |
ID=Dca18796.1;Parent=Dca18796 |
| scaffold198 |
Augustus |
exon |
33242 |
33402 |
. |
+ |
. |
ID=Dca18796.1.exon1;Parent=Dca18796.1 |
| scaffold198 |
Augus-PASA |
exon |
34456 |
34644 |
. |
+ |
. |
ID=Dca18796.1.exon2;Parent=Dca18796.1 |
| scaffold198 |
Augus-PASA |
exon |
34988 |
35093 |
. |
+ |
. |
ID=Dca18796.1.exon3;Parent=Dca18796.1 |
