Carnation DB

Dca18797.1

Annotation

5-exons
f-1
sp|A5APK4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_007863#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
AT3G10310.1 | Symbols: | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr3:3190208-3195005 FORWARD LENGTH=922
Repeat List (scaffold198)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18797.1	2	269	269	50.92	268	38	5e-41
Target_name	Start	End	Length	Cov(%)
sp\|A5APK4_VITVI	571	937	972	37.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18797.1	2	265	269	47.95	264	35	5e-34
Target_name	Start	End	Length	Cov(%)
AT3G10310.1	527	900	922	40.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold198	Augustus	mRNA	39089	40408	.	-	.	ID=Dca18797.1;Parent=Dca18797
scaffold198	Augustus	exon	39089	39257	.	-	.	ID=Dca18797.1.exon1;Parent=Dca18797.1
scaffold198	Augustus	exon	39424	39725	.	-	.	ID=Dca18797.1.exon2;Parent=Dca18797.1
scaffold198	Augustus	exon	39827	39990	.	-	.	ID=Dca18797.1.exon3;Parent=Dca18797.1
scaffold198	Augustus	exon	40143	40291	.	-	.	ID=Dca18797.1.exon4;Parent=Dca18797.1
scaffold198	Augustus	exon	40383	40408	.	-	.	ID=Dca18797.1.exon5;Parent=Dca18797.1