Carnation DB

Dca18800.1

Annotation

7-exons
f-1
sp|B9IBZ4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_807248#GO:0008270#1F0P0C
sp|B9RDC5_RICCO#Zinc finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1612000#GO:0008270#1F0P0C
Repeat List (scaffold198)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18800.1	1	308	308	83.76	308	84	3e-145
Target_name	Start	End	Length	Cov(%)
sp\|B9IBZ4_POPTR	1	309	309	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18800.1	1	306	308	81.81	306	83	1e-142
Target_name	Start	End	Length	Cov(%)
AT3G60800.1	1	307	307	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold198	Augus-PASA	mRNA	60464	64102	.	-	.	ID=Dca18800.1;Parent=Dca18800
scaffold198	Augus-PASA	exon	60464	60589	.	-	.	ID=Dca18800.1.exon1;Parent=Dca18800.1
scaffold198	Augus-PASA	exon	60682	60747	.	-	.	ID=Dca18800.1.exon2;Parent=Dca18800.1
scaffold198	Augus-PASA	exon	61470	61555	.	-	.	ID=Dca18800.1.exon3;Parent=Dca18800.1
scaffold198	Augus-PASA	exon	61666	61789	.	-	.	ID=Dca18800.1.exon4;Parent=Dca18800.1
scaffold198	Augus-PASA	exon	62529	62620	.	-	.	ID=Dca18800.1.exon5;Parent=Dca18800.1
scaffold198	Augus-PASA	exon	62701	62923	.	-	.	ID=Dca18800.1.exon6;Parent=Dca18800.1
scaffold198	Augus-PASA	exon	63893	64102	.	-	.	ID=Dca18800.1.exon7;Parent=Dca18800.1