Carnation DB

Dca18963.1

Annotation

7-exons
f-1
sp|B9RAA4_RICCO#Ribosomal pseudouridine synthase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1504920#GO:0003796;GO:0009982;GO:0003723;GO:0001522#3F1P0C
Repeat List (scaffold1991)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18963.1	1	293	293	56.99	293	57	1e-86
Target_name	Start	End	Length	Cov(%)
sp\|B9RAA4_RICCO	136	384	385	64.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18963.1	1	284	293	47.78	284	50	3e-69
Target_name	Start	End	Length	Cov(%)
AT5G51140.2	154	386	410	56.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1991	Augustus	mRNA	5100	9560	.	+	.	ID=Dca18963.1;Parent=Dca18963
scaffold1991	Augustus	exon	5100	5260	.	+	.	ID=Dca18963.1.exon1;Parent=Dca18963.1
scaffold1991	Augustus	exon	5355	5427	.	+	.	ID=Dca18963.1.exon2;Parent=Dca18963.1
scaffold1991	Augustus	exon	7163	7291	.	+	.	ID=Dca18963.1.exon3;Parent=Dca18963.1
scaffold1991	Augustus	exon	7768	7824	.	+	.	ID=Dca18963.1.exon4;Parent=Dca18963.1
scaffold1991	Augustus	exon	8193	8318	.	+	.	ID=Dca18963.1.exon5;Parent=Dca18963.1
scaffold1991	Augustus	exon	8896	9131	.	+	.	ID=Dca18963.1.exon6;Parent=Dca18963.1
scaffold1991	Augustus	exon	9461	9560	.	+	.	ID=Dca18963.1.exon7;Parent=Dca18963.1