Carnation DB

Dca18979.1

Annotation

8-exons
f-1
sp|F6HH92_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g05350#GO:0005622;GO:0005097#1F0P1C
AT4G13730.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr4:7970299-7974055 FORWARD LENGTH=449
Repeat List (scaffold1993)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18979.1	17	397	398	57.03	381	54	5e-115
Target_name	Start	End	Length	Cov(%)
sp\|F6HH92_VITVI	33	457	458	92.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18979.1	66	389	398	39.44	324	43	2e-81
Target_name	Start	End	Length	Cov(%)
AT4G13730.1	81	448	449	81.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1993	Augustus	mRNA	30435	33074	.	-	.	ID=Dca18979.1;Parent=Dca18979
scaffold1993	Augustus	exon	30435	30614	.	-	.	ID=Dca18979.1.exon1;Parent=Dca18979.1
scaffold1993	Augustus	exon	30718	30834	.	-	.	ID=Dca18979.1.exon2;Parent=Dca18979.1
scaffold1993	Augustus	exon	31049	31231	.	-	.	ID=Dca18979.1.exon3;Parent=Dca18979.1
scaffold1993	Augustus	exon	31661	31759	.	-	.	ID=Dca18979.1.exon4;Parent=Dca18979.1
scaffold1993	Augustus	exon	31854	31995	.	-	.	ID=Dca18979.1.exon5;Parent=Dca18979.1
scaffold1993	Augustus	exon	32079	32188	.	-	.	ID=Dca18979.1.exon6;Parent=Dca18979.1
scaffold1993	Augustus	exon	32468	32560	.	-	.	ID=Dca18979.1.exon7;Parent=Dca18979.1
scaffold1993	Augustus	exon	32802	33074	.	-	.	ID=Dca18979.1.exon8;Parent=Dca18979.1