Carnation DB

Dca192.1

Annotation

6-exons
f-1
sp|A9PCS2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_659552#unknown#0F0P0C
Os05t0104800-01 Similar to Eukaryotic translation initiation factor 3 subunit 5 (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f).
Repeat List (scaffold10)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca192.1	1	287	287	74.56	287	75	5e-128
Target_name	Start	End	Length	Cov(%)
sp\|A9PCS2_POPTR	1	287	287	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca192.1	16	287	287	65.15	272	69	1e-112
Target_name	Start	End	Length	Cov(%)
Os05t0104800-01	13	284	285	95.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10	Augustus	mRNA	484211	487896	.	-	.	ID=Dca192.1;Parent=Dca192
scaffold10	Augustus	exon	484211	484300	.	-	.	ID=Dca192.1.exon1;Parent=Dca192.1
scaffold10	Augustus	exon	485546	485659	.	-	.	ID=Dca192.1.exon2;Parent=Dca192.1
scaffold10	Augus-PASA	exon	485769	485890	.	-	.	ID=Dca192.1.exon3;Parent=Dca192.1
scaffold10	Augus-PASA	exon	485991	486220	.	-	.	ID=Dca192.1.exon4;Parent=Dca192.1
scaffold10	Augus-PASA	exon	486652	486731	.	-	.	ID=Dca192.1.exon5;Parent=Dca192.1
scaffold10	Augus-PASA	exon	487669	487896	.	-	.	ID=Dca192.1.exon6;Parent=Dca192.1