Carnation DB

Dca19205.1

Annotation

7-exons
f-1
sp|A9PGR8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_734153#GO:0016787#1F0P0C
sp|B9R9C7_RICCO#Pre-mRNA cleavage factor im, 25kD subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1496400#GO:0016787#1F0P0C
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19205.1	1	200	201	89.05	200	90	2e-104
Target_name	Start	End	Length	Cov(%)
sp\|A9PGR8_POPTR	1	201	202	99.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19205.1	6	200	201	85.57	195	88	1e-101
Target_name	Start	End	Length	Cov(%)
AT4G25550.1	4	199	200	98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augustus	mRNA	1258188	1261371	.	-	.	ID=Dca19205.1;Parent=Dca19205
scaffold2	Augustus	exon	1258188	1258259	.	-	.	ID=Dca19205.1.exon1;Parent=Dca19205.1
scaffold2	Augustus	exon	1258350	1258460	.	-	.	ID=Dca19205.1.exon2;Parent=Dca19205.1
scaffold2	Augustus	exon	1258558	1258644	.	-	.	ID=Dca19205.1.exon3;Parent=Dca19205.1
scaffold2	Augustus	exon	1258874	1258944	.	-	.	ID=Dca19205.1.exon4;Parent=Dca19205.1
scaffold2	Augustus	exon	1259034	1259127	.	-	.	ID=Dca19205.1.exon5;Parent=Dca19205.1
scaffold2	Augustus	exon	1259584	1259629	.	-	.	ID=Dca19205.1.exon6;Parent=Dca19205.1
scaffold2	Augustus	exon	1261247	1261371	.	-	.	ID=Dca19205.1.exon7;Parent=Dca19205.1