Carnation DB

Dca19214.1

Annotation

5-exons
f-1
sp|B9GNQ2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_754916#GO:0006355#0F1P0C
AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr4:16239566-16241052 REVERSE LENGTH=352
Repeat List (scaffold20)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19214.1	42	233	235	48.08	192	56	4e-46
Target_name	Start	End	Length	Cov(%)
sp\|B9GNQ2_POPTR	170	362	362	53.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19214.1	107	225	235	37.87	119	73	1e-44
Target_name	Start	End	Length	Cov(%)
AT4G33880.1	227	348	352	34.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold20	Augustus	mRNA	59369	61048	.	+	.	ID=Dca19214.1;Parent=Dca19214
scaffold20	Augustus	exon	59369	59614	.	+	.	ID=Dca19214.1.exon1;Parent=Dca19214.1
scaffold20	Augustus	exon	59698	59928	.	+	.	ID=Dca19214.1.exon2;Parent=Dca19214.1
scaffold20	Augustus	exon	60052	60117	.	+	.	ID=Dca19214.1.exon3;Parent=Dca19214.1
scaffold20	Augustus	exon	60287	60352	.	+	.	ID=Dca19214.1.exon4;Parent=Dca19214.1
scaffold20	Augustus	exon	60950	61048	.	+	.	ID=Dca19214.1.exon5;Parent=Dca19214.1