Carnation DB

Dca19496.1

Annotation

5-exons
f-1
sp|B9MTI7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_739607#GO:0005488#1F0P0C
AT2G36810.1 | Symbols: | ARM repeat superfamily protein | chr2:15425739-15439462 REVERSE LENGTH=1716
Repeat List (scaffold2016)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19496.1	27	151	152	38.15	125	47	7e-31
Target_name	Start	End	Length	Cov(%)
sp\|B9MTI7_POPTR	914	1038	1076	11.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19496.1	27	148	152	33.55	122	42	1e-24
Target_name	Start	End	Length	Cov(%)
AT2G36810.1	1541	1661	1716	7.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2016	Augustus	mRNA	8174	9160	.	+	.	ID=Dca19496.1;Parent=Dca19496
scaffold2016	Augustus	exon	8174	8317	.	+	.	ID=Dca19496.1.exon1;Parent=Dca19496.1
scaffold2016	Augustus	exon	8514	8599	.	+	.	ID=Dca19496.1.exon2;Parent=Dca19496.1
scaffold2016	Augustus	exon	8687	8780	.	+	.	ID=Dca19496.1.exon3;Parent=Dca19496.1
scaffold2016	Augustus	exon	8963	9070	.	+	.	ID=Dca19496.1.exon4;Parent=Dca19496.1
scaffold2016	Augustus	exon	9134	9160	.	+	.	ID=Dca19496.1.exon5;Parent=Dca19496.1