Dca19505.1
Annotation
- 3-exons
- f-179
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold20163)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19505.1 |
1 |
602 |
602 |
66.94 |
602 |
63 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
520 |
1159 |
1501 |
42.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19505.1 |
12 |
602 |
602 |
38.7 |
591 |
38 |
6e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
562 |
1152 |
1539 |
38.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold20163 |
Augustus |
mRNA |
107 |
2641 |
. |
+ |
. |
ID=Dca19505.1;Parent=Dca19505 |
| scaffold20163 |
Augustus |
exon |
107 |
211 |
. |
+ |
. |
ID=Dca19505.1.exon1;Parent=Dca19505.1 |
| scaffold20163 |
Augustus |
exon |
659 |
1037 |
. |
+ |
. |
ID=Dca19505.1.exon2;Parent=Dca19505.1 |
| scaffold20163 |
Augustus |
exon |
1142 |
2641 |
. |
+ |
. |
ID=Dca19505.1.exon3;Parent=Dca19505.1 |
