Dca19598.1
Annotation
- 2-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2023)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19598.1 |
28 |
167 |
167 |
51.49 |
140 |
62 |
2e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
926 |
1065 |
1333 |
10.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19598.1 |
33 |
167 |
167 |
43.11 |
135 |
54 |
1e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1027 |
1160 |
1428 |
9.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2023 |
Augustus |
mRNA |
657 |
1237 |
. |
- |
. |
ID=Dca19598.1;Parent=Dca19598 |
| scaffold2023 |
Augustus |
exon |
657 |
1063 |
. |
- |
. |
ID=Dca19598.1.exon1;Parent=Dca19598.1 |
| scaffold2023 |
Augustus |
exon |
1141 |
1237 |
. |
- |
. |
ID=Dca19598.1.exon2;Parent=Dca19598.1 |
