Dca19749.1
Annotation
- 2-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2035)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19749.1 |
24 |
235 |
628 |
20.54 |
212 |
61 |
3e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
739 |
947 |
1788 |
11.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19749.1 |
100 |
235 |
628 |
7.32 |
136 |
34 |
9e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
229 |
344 |
707 |
16.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2035 |
Augustus |
mRNA |
182 |
7683 |
. |
+ |
. |
ID=Dca19749.1;Parent=Dca19749 |
| scaffold2035 |
Augustus |
exon |
182 |
839 |
. |
+ |
. |
ID=Dca19749.1.exon1;Parent=Dca19749.1 |
| scaffold2035 |
Augustus |
exon |
6455 |
7683 |
. |
+ |
. |
ID=Dca19749.1.exon2;Parent=Dca19749.1 |
