Carnation DB

Dca19773.1

Annotation

7-exons
f-1
sp|B9MWW5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826973#GO:0016020#0F0P1C
AT1G54320.1 | Symbols: | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein | chr1:20275732-20277793 REVERSE LENGTH=349
Repeat List (scaffold2038)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19773.1	5	320	320	70.31	316	66	2e-132
Target_name	Start	End	Length	Cov(%)
sp\|B9MWW5_POPTR	13	353	353	96.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19773.1	11	318	320	64.37	308	62	2e-119
Target_name	Start	End	Length	Cov(%)
AT1G54320.1	22	349	349	93.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2038	Augustus	mRNA	1070	6434	.	+	.	ID=Dca19773.1;Parent=Dca19773
scaffold2038	Augustus	exon	1070	1124	.	+	.	ID=Dca19773.1.exon1;Parent=Dca19773.1
scaffold2038	Augustus	exon	1871	1929	.	+	.	ID=Dca19773.1.exon2;Parent=Dca19773.1
scaffold2038	Augustus	exon	2632	2748	.	+	.	ID=Dca19773.1.exon3;Parent=Dca19773.1
scaffold2038	Augustus	exon	3343	3413	.	+	.	ID=Dca19773.1.exon4;Parent=Dca19773.1
scaffold2038	Augustus	exon	4440	4749	.	+	.	ID=Dca19773.1.exon5;Parent=Dca19773.1
scaffold2038	Augustus	exon	5337	5626	.	+	.	ID=Dca19773.1.exon6;Parent=Dca19773.1
scaffold2038	Augustus	exon	6374	6434	.	+	.	ID=Dca19773.1.exon7;Parent=Dca19773.1