Dca2008.1
Annotation
- 2-exons
- f-1
- sp|D7LN43_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_323301#GO:0043531;GO:0006952#1F1P0C
- Os11t0633500-01 Similar to NBS-LRR disease resistance protein homologue (Fragment).
- Repeat List (scaffold1065)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2008.1 |
13 |
292 |
297 |
36.36 |
280 |
32 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LN43_ARALL |
9 |
338 |
829 |
39.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2008.1 |
1 |
295 |
297 |
37.03 |
295 |
31 |
4e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0633500-01 |
1 |
347 |
529 |
65.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1065 |
Augustus |
mRNA |
111854 |
112905 |
. |
- |
. |
ID=Dca2008.1;Parent=Dca2008 |
| scaffold1065 |
Augustus |
exon |
111854 |
112555 |
. |
- |
. |
ID=Dca2008.1.exon1;Parent=Dca2008.1 |
| scaffold1065 |
Augustus |
exon |
112714 |
112905 |
. |
- |
. |
ID=Dca2008.1.exon2;Parent=Dca2008.1 |
