Dca20121.1
Annotation
- 4-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2066)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20121.1 |
16 |
475 |
479 |
58.24 |
460 |
52 |
1e-150
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
361 |
895 |
896 |
59.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20121.1 |
119 |
462 |
479 |
26.3 |
344 |
30 |
7e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
973 |
1382 |
1401 |
29.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2066 |
Augustus |
mRNA |
20570 |
22531 |
. |
+ |
. |
ID=Dca20121.1;Parent=Dca20121 |
| scaffold2066 |
Augustus |
exon |
20570 |
20924 |
. |
+ |
. |
ID=Dca20121.1.exon1;Parent=Dca20121.1 |
| scaffold2066 |
Augustus |
exon |
21216 |
21379 |
. |
+ |
. |
ID=Dca20121.1.exon2;Parent=Dca20121.1 |
| scaffold2066 |
Augustus |
exon |
21510 |
21951 |
. |
+ |
. |
ID=Dca20121.1.exon3;Parent=Dca20121.1 |
| scaffold2066 |
Augustus |
exon |
22053 |
22531 |
. |
+ |
. |
ID=Dca20121.1.exon4;Parent=Dca20121.1 |
