Carnation DB

Dca20150.1

Annotation

9-exons
f-1
sp|B9IAL5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_246818#GO:0009055;GO:0016853;GO:0015035;GO:0045454;GO:0006662#3F2P0C
AT1G04980.1 | Symbols: ATPDIL2-2, ATPDI10, PDI10, PDIL2-2 | PDI-like 2-2 | chr1:1413869-1416120 REVERSE LENGTH=447
Repeat List (scaffold2068)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20150.1	28	432	446	78.25	405	87	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IAL5_POPTR	1	404	404	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20150.1	4	442	446	74.43	439	75	0
Target_name	Start	End	Length	Cov(%)
AT1G04980.1	1	446	447	99.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2068	Augus-PASA	mRNA	43641	49023	.	-	.	ID=Dca20150.1;Parent=Dca20150
scaffold2068	Augus-PASA	exon	43641	43836	.	-	.	ID=Dca20150.1.exon1;Parent=Dca20150.1
scaffold2068	Augus-PASA	exon	43938	44084	.	-	.	ID=Dca20150.1.exon2;Parent=Dca20150.1
scaffold2068	Augus-PASA	exon	44347	44492	.	-	.	ID=Dca20150.1.exon3;Parent=Dca20150.1
scaffold2068	Augus-PASA	exon	44590	44766	.	-	.	ID=Dca20150.1.exon4;Parent=Dca20150.1
scaffold2068	Augus-PASA	exon	45433	45532	.	-	.	ID=Dca20150.1.exon5;Parent=Dca20150.1
scaffold2068	Augus-PASA	exon	45758	45918	.	-	.	ID=Dca20150.1.exon6;Parent=Dca20150.1
scaffold2068	Augus-PASA	exon	46171	46284	.	-	.	ID=Dca20150.1.exon7;Parent=Dca20150.1
scaffold2068	Augus-PASA	exon	47639	47797	.	-	.	ID=Dca20150.1.exon8;Parent=Dca20150.1
scaffold2068	Augus-PASA	exon	48883	49023	.	-	.	ID=Dca20150.1.exon9;Parent=Dca20150.1